Yazar "Silme, Ragıp Soner" için listeleme
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Bacterial volatile organic compounds and gene-induced host-defense pathways
Silme, Ragıp Soner; Baysal, Ömür (ELSEVIER, 2022)The microbial volatile organic compounds (VOCs) directly and/or indirectly play a role in plant/fungi-microbe interactions. A number of different bacterial VOCs have been identified, comprising polyaromatic hydrocarbons. ... -
Biodegradation of essential oil by Enterobacter sp. induces plant growth and inhibits damping-off pathogens
Silme, Ragıp Soner; Baysal, Ömür (Parlar Scientific Publications, 2016)The soil microflora shelters community of dynamic microorganisms affecting biological activities of plant pathogens. Essential oil of Thymbra spicata oil is known to have antibacterial property. However, Enterobacter sp., ... -
Data mining and molecular dynamics analysis to detect HIV-1 reverse transcriptase RNase H activity inhibitor
Ghafoor, Naeem Abdul; Kırboğa, Kevser Kübra; Baysal, Ömür; Süzek, Barış Ethem; Silme, Ragıp Soner (nstitute for Ionics, 2023)HIV-1 is a deadly virus that affects millions of people worldwide. In this study, we aimed to inhibit viral replication by targeting one of the HIV-1 proteins and identifying a new drug candidate. We used data mining and ... -
The effect of a seed coating with Origanum vulgare essential oil on Clavibacter michiganensis subsp. michiganensis
Yılmaz, Meral; Baysal, Ömür; Silme, Ragıp Soner (Czech Academy of Agricultural Sciences, 2021)The study aimed to evaluate the efficacy of a seed film coating with Origanum vulgare Linnaeus essential oil (EO) against Clavibacter michiganensis subsp. michiganensis (Cmm) on tomatoes. Tomato seeds (cv. Rio Grande) ... -
GENETIC UNIFORMITY OF A SPECIFIC REGION IN SARS-CoV-2 GENOME AND REPURPOSING OF N-ACETYL-D-GLUCOSAMINE
Baysal, Ömür; Silme, Ragıp Soner; Karaaslan, Çağatay; Ignatov, Alexander N. (PARLAR SCIENTIFIC PUBLICATIONS (P S P), 2021)The causative agent of the viral pneumonia outbreak in the world identified as SARS-CoV-2 leads to a severe respiratory illness like SARS and MERS. The pathogen spreading has turned into a pandemic dissemination and increased ... -
GENOMIC CHARACTERIZATION AND PHYTOSTIMULATIVE EFFECT OF A NOVEL SERRATIA SPECIES
Çetinkaya, Agit; Baysal, Ömür; Silme, Ragıp Soner; Azim, M. Kamran; Saleem, Faizan (Serbian Genetics Society, 2022)Some of non-pathogenic bacteria are effective biocontrol agents and plant growth inducers besides its degradative property on polycyclic aromatic hydrocarbons (PAH). Herein, we report a novel candidate Serratia species ... -
Molecular dynamics analysis of N-acetyl-D-glucosamine against specific SARS-CoV-2’s pathogenicity factors
Baysal, Ömür; Ghafoor, Naeem Abdul; Silme, Ragıp Soner; Ignatov, Alexander N.; Kniazeva, Volha (Public Library of Science, 2021)The causative agent of the pandemic identified as SARS-CoV-2 leads to a severe respiratory illness similar to SARS and MERS with fever, cough, and shortness of breath symptoms and severe cases that can often be fatal. In ... -
Synthesis of Adenine-based Fluorescent and Naked-eye Chemosensors: Specific DNA Probes for the Detection of Bacterial Pathogens
Şener, Burak; Baysal, Ömür; Nadeem, Said; Silme, Ragıp Soner (Slovensko Kemijsko Drustvo, 2021)A rapid and confident tool to identify and diagnose bacterial pathogens with more accuracy using DNA as fingerprints is necessary. Herein, we report a smart chemosensor having a terminal adenine sticking to the thymine of ...
